Release week 2020-12-02

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222

structures analysed (26 full · 11.7%)

10.5%

confidently wrong

125.4%

novel sequences

10.5%

novel & wrong

0.954

median TM-score

⭐ This week's notable releases

12 novel sequences, 1 confidently wrong. Highlight: ER membrane protein complex subunit 4.

PDB	Protein	Flags	Why it matters
7ADO_D ↗	ER membrane protein complex subunit 4	novel · 100% confidently wrong	Genuinely unseen sequence (0% identity to anything AlphaFold trained on) — and AlphaFold got the fold wrong despite high confidence.
7ADP_D ↗	ER membrane protein complex subunit 4	novel · 100%	Genuinely unseen sequence (0% identity to anything AlphaFold trained on).
7ADP_E ↗	Membrane magnesium transporter 1	novel · 100%	Genuinely unseen sequence (0% identity to anything AlphaFold trained on).
7ADO_E ↗	Membrane magnesium transporter 1	novel · 100%	Genuinely unseen sequence (0% identity to anything AlphaFold trained on).
7ADO_C ↗	ER membrane protein complex subunit 3	novel · 100%	Genuinely unseen sequence (0% identity to anything AlphaFold trained on).
7ADP_C ↗	ER membrane protein complex subunit 3	novel · 100%	Genuinely unseen sequence (0% identity to anything AlphaFold trained on).

see all 222 structures ↓

Zoomed into the red "confidently wrong" box above (pLDDT ≥ 70, TM < 0.5) — the structures AlphaFold got confidently wrong.

The worst offenders ranked, one row per protein (AlphaFold has one model per sequence, so repeat depositions are collapsed — “×N” marks how many structures of that protein exist; the worst is shown). Each row joins what AlphaFold claimed (blue, pLDDT/100) to what the experiment showed (red, TM-score) — the longer the bar, the bigger the miss. Hover a dot to preview its Cα-deviation ribbon; click to open the full entry.

How to read this

Every point is one experimental protein structure. The horizontal axis is AlphaFold's own confidence in its prediction (mean pLDDT, 0–100). The vertical axis is how well that blind prediction actually matches the experiment (TM-score, 0–1; above 0.5 means the same fold, above 0.9 near-identical). Marker size grows with the FRAUD score (confidence-weighted error).

Cutoff: the shaded red box is the "confidently wrong" zone — AlphaFold was confident (mean pLDDT above 70) yet the fold is wrong (TM-score below 0.5). A predictor that had truly solved folding would leave that box empty.

Take-home: 1 of 222 structures (0.5%) are confidently wrong; median TM-score is 0.954.

Read moreShow less — how each metric is calculated

TM-score: how similar the two 3D shapes are overall, 0–1 (a random pair scores ~0.17, an identical fold ~1). Length-normalised so large and small proteins compare fairly. TM = (1/L) Σᵢ 1/(1 + (dᵢ/d₀)²) — dᵢ is the gap between the i-th aligned Cα atoms after best-fit superposition, and d₀ = 1.24(L−15)^⅓ − 1.8 sets the distance scale for length L. Ref: Zhang & Skolnick, Proteins 2004 doi:10.1002/prot.20264; computed with TM-align, doi:10.1093/nar/gki524.

pLDDT: AlphaFold's own confidence in each residue, 0–100 (higher = surer). It is the model predicting its own accuracy before ever seeing the experiment. We plot the per-structure mean. pLDDT = (1/N) Σᵢ pLDDTᵢ, where pLDDTᵢ is the network's confidence output for residue i.

FRAUD score: the headline number — how wrong the prediction was, weighted by how confident AlphaFold was, so a big error it was sure about counts most. FRAUD = (1/N) Σᵢ (pLDDTᵢ/100) · min(Δᵢ,15)/15, where Δᵢ is residue i's Cα distance from the experiment (Å) after superposition, capped at 15 Å. Runs 0 (perfect) to 1.

Novelty: how little AlphaFold had to go on — 100 minus the highest sequence identity between this protein and any structure released before the 2018-04-30 training cutoff. High = genuinely unseen (100% = nothing similar was ever in the training set). novelty = 100 − maxₚ identity(s, p) over pre-cutoff PDB chains p, with identity = 100 × (matching aligned residues)/(alignment length), from an MMseqs2 search.

Homology: the point colour. High novelty (above 70%) flags the sequence as novel (amber) — AlphaFold had no close template; otherwise a pre-cutoff homolog existed (blue) it could have learned the fold from. novel ⇔ novelty > 70%.

What the metrics mean

TM-score (0–1): overall fold match — above 0.5 is the same fold, above 0.9 near-identical. Cα-RMSD (Å): average backbone distance after best-fit superposition — lower is better (under 2 Å is excellent). lDDT (0–1): local accuracy measured without superposition — above 0.8 is good. Each bar counts how many structures fall in that range.

Take-home: median TM-score 0.954 — most predictions match the experimental fold well, with a long tail that do not.

Read moreShow less — how each metric is calculated

TM-score: overall shape match, 0–1 (above 0.5 = same fold, above 0.9 near-identical), length-normalised. TM = (1/L) Σᵢ 1/(1 + (dᵢ/d₀)²) with dᵢ the aligned-Cα gap after superposition and d₀ = 1.24(L−15)^⅓ − 1.8. Ref: Zhang & Skolnick, Proteins 2004 doi:10.1002/prot.20264.

Cα-RMSD: the average straight-line distance between matching backbone Cα atoms once the two structures are best-fit superposed (Å; lower is better, under ~2 Å excellent). RMSD = √( (1/N) Σᵢ |Pᵢ − (R·Qᵢ + t)|² ), with Pᵢ/Qᵢ the experimental/model Cα coordinates and R,t the rotation and translation from Kabsch superposition.

lDDT: local accuracy with no superposition — the fraction of short-range inter-residue distances the model reproduces, so it is not fooled by a single wrongly-placed domain. lDDT = (1/N) Σᵢ ¼ Σ_t 1[ |d_exp − d_model| < t ] over thresholds t ∈ {0.5, 1, 2, 4} Å and all residue pairs within 15 Å.

Trend over time

The blue line is the mean TM-score of the structures by their deposit month; the red bars count how many were confidently wrong. Binning by deposit date (rather than by when we processed them) gives an even timeline, tracking whether AlphaFold's accuracy on newly-deposited structures is holding steady, improving, or slipping as the PDB keeps growing. Months with fewer than 5 structures are omitted so each point is a meaningful average. A dashed trend line is drawn only if the change over time is statistically significant.

Read moreShow less — how each metric is calculated

Mean TM-score: the month's average shape-match score. TM̄ = (1/M) Σ TM over the M structures deposited that month.

Trend line: a monotonic-trend test over the monthly means — Mann-Kendall (Kendall's τ) for significance, with a robust Theil-Sen slope for the line. Rank-based, so it tolerates the skewed TM distribution and noisy low-count months. Shown only when p < 0.05; otherwise a note reports that no significant trend was found.

Confidently wrong: the count that were both confident and wrong. count( mean pLDDT > 70 AND TM < 0.5 ).

Matched structures

PDB	UniProt	Protein	Method	Å	Deposited	Novelty %	pLDDT	TM	lDDT	GDT_TS	RMSD	FRAUD	Flag
6ZXE_k	Q8N1G4	Leucine-rich repeat-containing protein 47	EM	3.00	2020-07-29	70.20 novel	84.32	0.58	0.80	0.06	30.92	0.83	ok
6ZXD_k	Q8N1G4	Leucine-rich repeat-containing protein 47	EM	3.20	2020-07-29	70.20 novel	84.32	0.58	0.80	0.06	30.88	0.82	ok
6ZXG_k	Q8N1G4	Leucine-rich repeat-containing protein 47	EM	2.60	2020-07-29	70.20 novel	84.32	0.59	0.81	0.06	30.47	0.82	ok
6ZXF_k	Q8N1G4	Leucine-rich repeat-containing protein 47	EM	3.70	2020-07-29	70.20 novel	84.32	0.59	0.76	0.00	30.17	0.82	ok
7ADP_D	Q5J8M3	ER membrane protein complex subunit 4	EM	3.60	2020-09-15	100.00 novel	66.21	0.28	0.72	0.00	36.20	0.66	ok
7ADO_D	Q5J8M3	ER membrane protein complex subunit 4	EM	3.39	2020-09-15	100.00 novel	70.23	0.37	0.77	0.00	23.11	0.65	wrong
7BYN_B	P0DP25	Calmodulin-3	EM	3.30	2020-04-23	0.00	86.28	0.54	0.78	12.33	11.90	0.56	ok
7BYM_B	P0DP25	Calmodulin-3	EM	3.10	2020-04-23	0.00	86.28	0.54	0.78	12.33	11.90	0.56	ok
7BYL_B	P0DP25	Calmodulin-3	EM	2.50	2020-04-23	0.00	86.28	0.54	0.78	12.33	11.90	0.56	ok
6ZXD_y	Q9ULX3	RNA-binding protein NOB1	EM	3.20	2020-07-29	7.60	79.92	0.53	0.63	10.62	14.77	0.50	ok
6ZXE_y	Q9ULX3	RNA-binding protein NOB1	EM	3.00	2020-07-29	7.60	79.92	0.54	0.64	10.23	14.76	0.50	ok
7ADP_E	Q8N4V1	Membrane magnesium transporter 1	EM	3.60	2020-09-15	100.00 novel	86.09	0.60	0.86	18.75	9.57	0.46	ok
7ADO_E	Q8N4V1	Membrane magnesium transporter 1	EM	3.39	2020-09-15	100.00 novel	85.67	0.61	0.86	17.27	9.45	0.46	ok
6LE1_A	Q8IYX4	Dead end protein homolog 1	X-ray	2.30	2019-11-23	46.70	86.65	0.75	0.83	32.30	10.30	0.33	ok
7ADO_C	Q9P0I2	ER membrane protein complex subunit 3	EM	3.39	2020-09-15	100.00 novel	84.00	0.62	0.84	29.68	6.73	0.32	ok
7ADP_C	Q9P0I2	ER membrane protein complex subunit 3	EM	3.60	2020-09-15	100.00 novel	84.36	0.61	0.86	33.25	6.18	0.29	ok
7KSM_A	P36776	Lon protease homolog, mitochondrial	EM	3.20	2020-11-23	—	76.69	0.73	—	—	—	0.21	ok
6ZXE_f	P62979	Ubiquitin-40S ribosomal protein S27a	EM	3.00	2020-07-29	—	89.56	0.77	—	—	—	0.21	ok
6ZXD_R	P08708	40S ribosomal protein S17	EM	3.20	2020-07-29	—	86.25	0.77	—	—	—	0.19	ok
6ZXG_R	P08708	40S ribosomal protein S17	EM	2.60	2020-07-29	—	86.25	0.78	—	—	—	0.19	ok
7JSQ_A	O75190	DnaJ homolog subfamily B member 6	NMR	—	2020-08-15	—	62.97	0.71	—	—	—	0.18	ok
6ZXD_f	P62979	Ubiquitin-40S ribosomal protein S27a	EM	3.20	2020-07-29	—	89.56	0.81	—	—	—	0.17	ok
6ZXE_R	P08708	40S ribosomal protein S17	EM	3.00	2020-07-29	—	86.25	0.80	—	—	—	0.17	ok
6ZXE_c	P62857	40S ribosomal protein S28	EM	3.00	2020-07-29	—	91.00	0.82	—	—	—	0.16	ok
6ZXF_R	P08708	40S ribosomal protein S17	EM	3.70	2020-07-29	—	86.25	0.82	—	—	—	0.16	ok
6ZXF_e	P62861	40S ribosomal protein S30	EM	3.70	2020-07-29	—	91.00	0.83	—	—	—	0.15	ok
6ZBU_C	O75376	Nuclear receptor corepressor 1	X-ray	2.46	2020-06-09	—	33.12	0.21	0.69	25.00	9.17	0.15	ok
6ZXG_z	Q9BRS2	Serine/threonine-protein kinase RIO1	EM	2.60	2020-07-29	—	68.75	0.78	—	—	—	0.15	ok
6XYX_C	O75376	Nuclear receptor corepressor 1	X-ray	1.44	2020-01-31	—	33.10	0.26	0.74	25.00	9.07	0.14	ok
6ZXF_f	P62979	Ubiquitin-40S ribosomal protein S27a	EM	3.70	2020-07-29	—	89.56	0.84	—	—	—	0.14	ok
6XXS_C	O75376	Nuclear receptor corepressor 1	X-ray	3.25	2020-01-28	—	33.61	0.26	0.71	27.94	8.69	0.14	ok
6ZXD_e	P62861	40S ribosomal protein S30	EM	3.20	2020-07-29	—	91.00	0.85	—	—	—	0.13	ok
6VGC_A	P20292	5-lipoxygenase-activating protein	X-ray	2.37	2020-01-07	—	89.38	0.85	—	—	—	0.13	ok
6XK9_B	Q16531	DNA damage-binding protein 1	X-ray	3.64	2020-06-25	—	92.00	0.86	—	—	—	0.13	ok
6ZXF_z	Q9BRS2	Serine/threonine-protein kinase RIO1	EM	3.70	2020-07-29	—	68.75	0.81	—	—	—	0.13	ok
6ZXE_d	P62273	40S ribosomal protein S29	EM	3.00	2020-07-29	—	93.69	0.86	—	—	—	0.13	ok
6ZXG_e	P62861	40S ribosomal protein S30	EM	2.60	2020-07-29	—	91.00	0.86	—	—	—	0.13	ok
6VGI_A	P20292	5-lipoxygenase-activating protein	X-ray	2.61	2020-01-08	—	89.38	0.86	—	—	—	0.12	ok
7ADO_G	Q9NPA0	ER membrane protein complex subunit 7	EM	3.39	2020-09-15	—	72.94	0.84	—	—	—	0.12	ok
6ZXF_y	Q9ULX3	RNA-binding protein NOB1	EM	3.70	2020-07-29	—	72.62	0.84	—	—	—	0.12	ok
6ZXF_P	P62841	40S ribosomal protein S15	EM	3.70	2020-07-29	—	86.44	0.87	—	—	—	0.12	ok
6WMF_B	Q8N6L0	Protein KASH5	X-ray	2.60	2020-04-21	100.00 novel	47.27	0.21	0.68	48.33	3.99	0.11	ok
6ZXE_e	P62861	40S ribosomal protein S30	EM	3.00	2020-07-29	—	91.00	0.88	—	—	—	0.11	ok
6ZXG_P	P62841	40S ribosomal protein S15	EM	2.60	2020-07-29	—	86.44	0.87	—	—	—	0.11	ok
6ZXG_Z	P62851	40S ribosomal protein S25	EM	2.60	2020-07-29	—	73.25	0.85	—	—	—	0.11	ok
6ZXG_f	P62979	Ubiquitin-40S ribosomal protein S27a	EM	2.60	2020-07-29	—	89.56	0.89	—	—	—	0.10	ok
6ZXF_j	Q8N9N8	Probable RNA-binding protein EIF1AD	EM	3.70	2020-07-29	—	75.69	0.87	—	—	—	0.10	ok
6ZXD_c	P62857	40S ribosomal protein S28	EM	3.20	2020-07-29	—	91.00	0.89	—	—	—	0.10	ok
6ZXG_j	Q8N9N8	Probable RNA-binding protein EIF1AD	EM	2.60	2020-07-29	—	75.69	0.87	—	—	—	0.10	ok
6ZXF_d	P62273	40S ribosomal protein S29	EM	3.70	2020-07-29	—	93.69	0.90	—	—	—	0.10	ok
6ZXD_z	Q9BRS2	Serine/threonine-protein kinase RIO1	EM	3.20	2020-07-29	—	68.75	0.86	—	—	—	0.10	ok
6WME_B	Q6ZMZ3	Nesprin-3	X-ray	1.53	2020-04-21	14.30	48.87	0.18	0.79	53.12	3.42	0.09	ok
6ZXE_z	Q9BRS2	Serine/threonine-protein kinase RIO1	EM	3.00	2020-07-29	—	68.75	0.86	—	—	—	0.09	ok
6ZXF_c	P62857	40S ribosomal protein S28	EM	3.70	2020-07-29	—	91.00	0.90	—	—	—	0.09	ok
6ZXG_c	P62857	40S ribosomal protein S28	EM	2.60	2020-07-29	—	91.00	0.90	—	—	—	0.09	ok
6ZXD_M	P25398	40S ribosomal protein S12	EM	3.20	2020-07-29	—	80.38	0.89	—	—	—	0.09	ok
7ADP_F	Q9BV81	ER membrane protein complex subunit 6	EM	3.60	2020-09-15	—	82.62	0.89	—	—	—	0.09	ok
6ZXE_Z	P62851	40S ribosomal protein S25	EM	3.00	2020-07-29	—	73.25	0.88	—	—	—	0.09	ok
6ZXD_d	P62273	40S ribosomal protein S29	EM	3.20	2020-07-29	—	93.69	0.91	—	—	—	0.09	ok
6ZXE_M	P25398	40S ribosomal protein S12	EM	3.00	2020-07-29	—	80.38	0.89	—	—	—	0.09	ok
7ADP_B	Q15006	ER membrane protein complex subunit 2	EM	3.60	2020-09-15	—	94.25	0.91	—	—	—	0.09	ok
6ZXG_d	P62273	40S ribosomal protein S29	EM	2.60	2020-07-29	—	93.69	0.91	—	—	—	0.08	ok
7ADO_B	Q15006	ER membrane protein complex subunit 2	EM	3.39	2020-09-15	—	94.25	0.91	—	—	—	0.08	ok
6ZXE_P	P62841	40S ribosomal protein S15	EM	3.00	2020-07-29	—	86.44	0.90	—	—	—	0.08	ok
7ADO_F	Q9BV81	ER membrane protein complex subunit 6	EM	3.39	2020-09-15	—	82.62	0.90	—	—	—	0.08	ok
6XXS_A	P41182	B-cell lymphoma 6 protein	X-ray	3.25	2020-01-28	—	52.06	0.85	—	—	—	0.08	ok
6ZXF_b	P42677	40S ribosomal protein S27	EM	3.70	2020-07-29	—	92.44	0.92	—	—	—	0.07	ok
6ZXE_S	P62269	40S ribosomal protein S18	EM	3.00	2020-07-29	—	88.69	0.92	—	—	—	0.07	ok
6XWF_A	P41182	B-cell lymphoma 6 protein	X-ray	1.60	2020-01-23	—	52.06	0.87	—	—	—	0.07	ok
6ZXD_L	P62280	40S ribosomal protein S11	EM	3.20	2020-07-29	—	88.06	0.92	—	—	—	0.07	ok
6ZXD_P	P62841	40S ribosomal protein S15	EM	3.20	2020-07-29	—	86.44	0.92	—	—	—	0.07	ok
6ZXE_U	P60866	40S ribosomal protein S20	EM	3.00	2020-07-29	—	85.25	0.92	—	—	—	0.07	ok
6ZXE_b	P42677	40S ribosomal protein S27	EM	3.00	2020-07-29	—	92.44	0.93	—	—	—	0.06	ok
6ZXE_L	P62280	40S ribosomal protein S11	EM	3.00	2020-07-29	—	88.06	0.93	—	—	—	0.06	ok
6ZXD_b	P42677	40S ribosomal protein S27	EM	3.20	2020-07-29	—	92.44	0.93	—	—	—	0.06	ok
6WMD_B	Q8N205	Nesprin-4	X-ray	1.50	2020-04-21	100.00 novel	44.52	0.26	0.91	64.71	2.23	0.06	ok
6ZXD_U	P60866	40S ribosomal protein S20	EM	3.20	2020-07-29	—	85.25	0.93	—	—	—	0.06	ok
6WMG_A	Q9UH99	SUN domain-containing protein 2	X-ray	1.90	2020-04-21	—	67.88	0.92	—	—	—	0.05	ok
6ZXG_b	P42677	40S ribosomal protein S27	EM	2.60	2020-07-29	—	92.44	0.94	—	—	—	0.05	ok
7ADP_A	Q8N766	ER membrane protein complex subunit 1	EM	3.60	2020-09-15	—	87.44	0.94	—	—	—	0.05	ok
6ZXD_S	P62269	40S ribosomal protein S18	EM	3.20	2020-07-29	—	88.69	0.94	—	—	—	0.05	ok
6ZXE_F	P46782	40S ribosomal protein S5	EM	3.00	2020-07-29	—	90.44	0.94	—	—	—	0.05	ok
6ZRD_P	Q13330	macrocyclic peptide based on residues 659-	X-ray	2.50	2020-07-13	—	71.61	0.61	0.85	89.29	1.32	0.05	ok
6ZXD_Z	P62851	40S ribosomal protein S25	EM	3.20	2020-07-29	—	73.25	0.93	—	—	—	0.05	ok
6VLA_A	Q9H0A0	Intragenic antimicrobial peptide	NMR	—	2020-01-23	—	89.89	0.54	0.89	91.18	1.08	0.05	ok
7ADP_H	O43402	ER membrane protein complex subunit 8	EM	3.60	2020-09-15	—	91.31	0.94	—	—	—	0.05	ok
6ZXG_U	P60866	40S ribosomal protein S20	EM	2.60	2020-07-29	—	85.25	0.94	—	—	—	0.05	ok
6WH1_B	P49916	DNA ligase 3 alpha	X-ray	2.40	2020-04-07	—	75.38	0.93	—	—	—	0.05	ok
6ZXF_Y	P62847	40S ribosomal protein S24	EM	3.70	2020-07-29	—	88.69	0.94	—	—	—	0.05	ok
6ZXF_S	P62269	40S ribosomal protein S18	EM	3.70	2020-07-29	—	88.69	0.94	—	—	—	0.05	ok
6XXS_E	P41182	B-cell lymphoma 6 protein	X-ray	3.25	2020-01-28	—	52.06	0.90	—	—	—	0.05	ok
6ZXF_U	P60866	40S ribosomal protein S20	EM	3.70	2020-07-29	—	85.25	0.94	—	—	—	0.05	ok
6ZXD_Y	P62847	40S ribosomal protein S24	EM	3.20	2020-07-29	—	88.69	0.95	—	—	—	0.05	ok
6ZXF_B	P61247	40S ribosomal protein S3a	EM	3.70	2020-07-29	—	82.94	0.94	—	—	—	0.05	ok
6ZXE_K	P46783	40S ribosomal protein S10	EM	3.00	2020-07-29	—	73.81	0.94	—	—	—	0.05	ok
6ZXE_Y	P62847	40S ribosomal protein S24	EM	3.00	2020-07-29	—	88.69	0.95	—	—	—	0.05	ok
6ZXF_M	P25398	40S ribosomal protein S12	EM	3.70	2020-07-29	—	80.38	0.94	—	—	—	0.05	ok
6ZXG_Y	P62847	40S ribosomal protein S24	EM	2.60	2020-07-29	—	88.69	0.95	—	—	—	0.04	ok
6ZXE_D	P23396	40S ribosomal protein S3	EM	3.00	2020-07-29	—	91.06	0.95	—	—	—	0.04	ok
6XZZ_A	P41182	B-cell lymphoma 6 protein	X-ray	1.39	2020-02-05	—	52.06	0.92	—	—	—	0.04	ok
7ADP_I	Q5UCC4	ER membrane protein complex subunit 10	EM	3.60	2020-09-15	—	77.56	0.94	—	—	—	0.04	ok
6ZRD_A	Q09028	Histone-binding protein RBBP4	X-ray	2.50	2020-07-13	—	91.69	0.95	—	—	—	0.04	ok
6XYX_A	P41182	B-cell lymphoma 6 protein	X-ray	1.44	2020-01-31	—	52.06	0.92	—	—	—	0.04	ok
6WMD_A	Q9UH99	SUN domain-containing protein 2	X-ray	1.50	2020-04-21	—	67.88	0.94	—	—	—	0.04	ok
6ZXG_S	P62269	40S ribosomal protein S18	EM	2.60	2020-07-29	—	88.69	0.95	—	—	—	0.04	ok
6WME_A	Q9UH99	SUN domain-containing protein 2	X-ray	1.53	2020-04-21	—	67.88	0.94	—	—	—	0.04	ok
6ZXG_M	P25398	40S ribosomal protein S12	EM	2.60	2020-07-29	—	80.38	0.95	—	—	—	0.04	ok
6ULV_A	O60885	Bromodomain-containing protein 4	X-ray	2.20	2019-10-08	1.60	96.38	0.97	0.96	96.76	0.88	0.04	ok
7AKG_A	O94768	Serine/threonine-protein kinase 17B	X-ray	2.08	2020-09-30	—	81.19	0.95	—	—	—	0.04	ok
7ADO_H	O43402	ER membrane protein complex subunit 8	EM	3.39	2020-09-15	—	91.31	0.96	—	—	—	0.04	ok
7ADO_A	Q8N766	ER membrane protein complex subunit 1	EM	3.39	2020-09-15	—	87.44	0.96	—	—	—	0.04	ok
6V2W_A	P15056	Serine/threonine-protein kinase B-raf	X-ray	3.12	2019-11-25	—	66.38	0.94	—	—	—	0.04	ok
6ZXF_Z	P62851	40S ribosomal protein S25	EM	3.70	2020-07-29	—	73.25	0.95	—	—	—	0.04	ok
6ZXF_J	P46781	40S ribosomal protein S9	EM	3.70	2020-07-29	—	88.12	0.96	—	—	—	0.04	ok
7ADO_I	Q5UCC4	ER membrane protein complex subunit 10	EM	3.39	2020-09-15	—	77.56	0.95	—	—	—	0.04	ok
6ZXD_I	P62241	40S ribosomal protein S8	EM	3.20	2020-07-29	—	93.00	0.96	—	—	—	0.03	ok
6ZXD_H	P62081	40S ribosomal protein S7	EM	3.20	2020-07-29	—	86.88	0.96	—	—	—	0.03	ok
6XE7_A	P69905	Hemoglobin subunit alpha	X-ray	2.00	2020-06-12	—	98.06	0.97	—	—	—	0.03	ok
7APF_A	P52333	Tyrosine-protein kinase JAK3	X-ray	1.95	2020-10-16	—	85.69	0.96	—	—	—	0.03	ok
6XDT_A	P69905	Hemoglobin subunit alpha	X-ray	1.90	2020-06-11	—	98.06	0.97	—	—	—	0.03	ok
6ZXE_I	P62241	40S ribosomal protein S8	EM	3.00	2020-07-29	—	93.00	0.96	—	—	—	0.03	ok
6ZXF_X	P62266	40S ribosomal protein S23	EM	3.70	2020-07-29	—	94.88	0.97	—	—	—	0.03	ok
6ZXD_G	P62753	40S ribosomal protein S6	EM	3.20	2020-07-29	—	94.19	0.97	—	—	—	0.03	ok
6XK9_A	P15170	Eukaryotic peptide chain release factor GT	X-ray	3.64	2020-06-25	—	81.81	0.96	—	—	—	0.03	ok
6V34_A	P15056	Serine/threonine-protein kinase B-raf	X-ray	3.15	2019-11-25	—	66.38	0.95	—	—	—	0.03	ok
6ZXF_D	P23396	40S ribosomal protein S3	EM	3.70	2020-07-29	—	91.06	0.97	—	—	—	0.03	ok
6ZXE_T	P39019	40S ribosomal protein S19	EM	3.00	2020-07-29	—	92.00	0.97	—	—	—	0.03	ok
6ZXD_K	P46783	40S ribosomal protein S10	EM	3.20	2020-07-29	—	73.81	0.96	—	—	—	0.03	ok
6ZXE_Q	P62249	40S ribosomal protein S16	EM	3.00	2020-07-29	—	93.88	0.97	—	—	—	0.03	ok
6ZXE_O	P62263	40S ribosomal protein S14	EM	3.00	2020-07-29	—	90.12	0.97	—	—	—	0.03	ok
6ZXD_O	P62263	40S ribosomal protein S14	EM	3.20	2020-07-29	—	90.12	0.97	—	—	—	0.03	ok
6WMF_A	Q9UH99	SUN domain-containing protein 2	X-ray	2.60	2020-04-21	—	67.88	0.95	—	—	—	0.03	ok
6ZXF_V	P63220	40S ribosomal protein S21	EM	3.70	2020-07-29	—	95.50	0.97	—	—	—	0.03	ok
6ZPD_A	P49638	Alpha-tocopherol transfer protein	X-ray	2.24	2020-07-08	—	94.12	0.97	—	—	—	0.03	ok
7D42_A	Q96RI1	Bile acid receptor	X-ray	2.70	2020-09-22	—	68.81	0.96	—	—	—	0.03	ok
6ZXF_I	P62241	40S ribosomal protein S8	EM	3.70	2020-07-29	—	93.00	0.97	—	—	—	0.03	ok
6ZXD_X	P62266	40S ribosomal protein S23	EM	3.20	2020-07-29	—	94.88	0.97	—	—	—	0.03	ok
6ZXF_H	P62081	40S ribosomal protein S7	EM	3.70	2020-07-29	—	86.88	0.97	—	—	—	0.03	ok
6ZXD_F	P46782	40S ribosomal protein S5	EM	3.20	2020-07-29	—	90.44	0.97	—	—	—	0.03	ok
6ZXF_G	P62753	40S ribosomal protein S6	EM	3.70	2020-07-29	—	94.19	0.97	—	—	—	0.03	ok
6YLU_A	P31947	14-3-3 protein sigma	X-ray	1.88	2020-04-07	—	92.88	0.97	—	—	—	0.03	ok
6ZXE_G	P62753	40S ribosomal protein S6	EM	3.00	2020-07-29	—	94.19	0.97	—	—	—	0.03	ok
6ZXD_V	P63220	40S ribosomal protein S21	EM	3.20	2020-07-29	—	95.50	0.97	—	—	—	0.03	ok
6ZXG_I	P62241	40S ribosomal protein S8	EM	2.60	2020-07-29	—	93.00	0.97	—	—	—	0.03	ok
6WH1_A	P18887	X-ray repair cross complementing protein 1	X-ray	2.40	2020-04-07	—	69.44	0.96	—	—	—	0.03	ok
6ZXE_H	P62081	40S ribosomal protein S7	EM	3.00	2020-07-29	—	86.88	0.97	—	—	—	0.03	ok
6ZCJ_A	P31947	14-3-3 protein sigma	X-ray	1.53	2020-06-11	—	92.88	0.97	—	—	—	0.03	ok
6ZXE_g	P63244	Receptor of activated protein C kinase 1	EM	3.00	2020-07-29	—	92.44	0.97	—	—	—	0.03	ok
6ZXD_D	P23396	40S ribosomal protein S3	EM	3.20	2020-07-29	—	91.06	0.97	—	—	—	0.03	ok
6ZXG_X	P62266	40S ribosomal protein S23	EM	2.60	2020-07-29	—	94.88	0.97	—	—	—	0.03	ok
6XE7_B	P68871	Hemoglobin subunit beta	X-ray	2.00	2020-06-12	—	97.19	0.97	—	—	—	0.03	ok
6ZXE_X	P62266	40S ribosomal protein S23	EM	3.00	2020-07-29	—	94.88	0.97	—	—	—	0.03	ok
6XDT_B	P68871	Hemoglobin subunit beta	X-ray	1.90	2020-06-11	—	97.19	0.97	—	—	—	0.03	ok
6ZXF_Q	P62249	40S ribosomal protein S16	EM	3.70	2020-07-29	—	93.88	0.97	—	—	—	0.03	ok
6ZXG_J	P46781	40S ribosomal protein S9	EM	2.60	2020-07-29	—	88.12	0.97	—	—	—	0.03	ok
6ZXD_J	P46781	40S ribosomal protein S9	EM	3.20	2020-07-29	—	88.12	0.97	—	—	—	0.02	ok
6ZXF_L	P62280	40S ribosomal protein S11	EM	3.70	2020-07-29	—	88.06	0.97	—	—	—	0.02	ok
6ZXE_V	P63220	40S ribosomal protein S21	EM	3.00	2020-07-29	—	95.50	0.97	—	—	—	0.02	ok
6ZXD_x	Q9NRX1	RNA-binding protein PNO1	EM	3.20	2020-07-29	—	77.38	0.97	—	—	—	0.02	ok
6ZXD_T	P39019	40S ribosomal protein S19	EM	3.20	2020-07-29	—	92.00	0.98	—	—	—	0.02	ok
6ZXD_g	P63244	Receptor of activated protein C kinase 1	EM	3.20	2020-07-29	—	92.44	0.98	—	—	—	0.02	ok
6ZXG_H	P62081	40S ribosomal protein S7	EM	2.60	2020-07-29	—	86.88	0.97	—	—	—	0.02	ok
6ZXE_J	P46781	40S ribosomal protein S9	EM	3.00	2020-07-29	—	88.12	0.97	—	—	—	0.02	ok
7D42_B	Q15596	Peptide from Nuclear receptor coactivator	X-ray	2.70	2020-09-22	—	44.53	0.67	0.91	93.18	0.80	0.02	ok
6ZXD_Q	P62249	40S ribosomal protein S16	EM	3.20	2020-07-29	—	93.88	0.98	—	—	—	0.02	ok
6V3P_A	P13688	Carcinoembryonic antigen-related cell adhe	X-ray	3.25	2019-11-26	—	81.56	0.97	—	—	—	0.02	ok
6ZXG_G	P62753	40S ribosomal protein S6	EM	2.60	2020-07-29	—	94.19	0.98	—	—	—	0.02	ok
6ZXF_W	P62244	40S ribosomal protein S15a	EM	3.70	2020-07-29	—	93.06	0.98	—	—	—	0.02	ok
6ZXE_x	Q9NRX1	RNA-binding protein PNO1	EM	3.00	2020-07-29	—	77.38	0.97	—	—	—	0.02	ok
6ZXG_L	P62280	40S ribosomal protein S11	EM	2.60	2020-07-29	—	88.06	0.98	—	—	—	0.02	ok
6ZXF_O	P62263	40S ribosomal protein S14	EM	3.70	2020-07-29	—	90.12	0.98	—	—	—	0.02	ok
6WH2_A	P18887	X-ray repair cross complementing protein 1	X-ray	2.41	2020-04-07	—	69.44	0.97	—	—	—	0.02	ok
6V2U_A	P15056	Serine/threonine-protein kinase B-raf	X-ray	3.78	2019-11-25	—	66.38	0.97	—	—	—	0.02	ok
6ZXG_D	P23396	40S ribosomal protein S3	EM	2.60	2020-07-29	—	91.06	0.98	—	—	—	0.02	ok
6V2W_B	Q02750	Dual specificity mitogen-activated protein	X-ray	3.12	2019-11-25	—	83.25	0.98	—	—	—	0.02	ok
7A41_A	Q9UDY8	Mucosa-associated lymphoid tissue lymphoma	X-ray	2.13	2020-08-19	—	79.44	0.98	—	—	—	0.02	ok
6ZXG_h	P62854	40S ribosomal protein S26	EM	2.60	2020-07-29	—	85.81	0.98	—	—	—	0.02	ok
6ZXG_Q	P62249	40S ribosomal protein S16	EM	2.60	2020-07-29	—	93.88	0.98	—	—	—	0.02	ok
6ZXF_N	P62277	40S ribosomal protein S13	EM	3.70	2020-07-29	—	94.06	0.98	—	—	—	0.02	ok
7APG_A	P52333	Tyrosine-protein kinase JAK3	X-ray	2.40	2020-10-16	—	85.69	0.98	—	—	—	0.02	ok
6ZXG_V	P63220	40S ribosomal protein S21	EM	2.60	2020-07-29	—	95.50	0.98	—	—	—	0.02	ok
6ZXD_N	P62277	40S ribosomal protein S13	EM	3.20	2020-07-29	—	94.06	0.98	—	—	—	0.02	ok
6ZXE_N	P62277	40S ribosomal protein S13	EM	3.00	2020-07-29	—	94.06	0.98	—	—	—	0.02	ok
6ZXF_T	P39019	40S ribosomal protein S19	EM	3.70	2020-07-29	—	92.00	0.98	—	—	—	0.02	ok
6ZXF_g	P63244	Receptor of activated protein C kinase 1	EM	3.70	2020-07-29	—	92.44	0.98	—	—	—	0.02	ok
6ZXE_B	P61247	40S ribosomal protein S3a	EM	3.00	2020-07-29	—	82.94	0.98	—	—	—	0.02	ok
7AJN_A	O60885	Bromodomain-containing protein 4	X-ray	1.48	2020-09-29	—	55.31	0.97	—	—	—	0.02	ok
6ZXD_B	P61247	40S ribosomal protein S3a	EM	3.20	2020-07-29	—	82.94	0.98	—	—	—	0.01	ok
6ZXG_N	P62277	40S ribosomal protein S13	EM	2.60	2020-07-29	—	94.06	0.98	—	—	—	0.01	ok
6WLG_A	Q68E01	Integrator complex subunit 3	X-ray	3.11	2020-04-20	—	83.06	0.98	—	—	—	0.01	ok
6ZXF_K	P46783	40S ribosomal protein S10	EM	3.70	2020-07-29	—	73.81	0.98	—	—	—	0.01	ok
6ZXD_W	P62244	40S ribosomal protein S15a	EM	3.20	2020-07-29	—	93.06	0.98	—	—	—	0.01	ok
6ZXD_A	P08865	40S ribosomal protein SA	EM	3.20	2020-07-29	—	79.25	0.98	—	—	—	0.01	ok
6ZXF_A	P08865	40S ribosomal protein SA	EM	3.70	2020-07-29	—	79.25	0.98	—	—	—	0.01	ok
6ZXF_F	P46782	40S ribosomal protein S5	EM	3.70	2020-07-29	—	90.44	0.99	—	—	—	0.01	ok
6ZXD_C	P15880	40S ribosomal protein S2	EM	3.20	2020-07-29	—	80.94	0.98	—	—	—	0.01	ok
6ZXE_W	P62244	40S ribosomal protein S15a	EM	3.00	2020-07-29	—	93.06	0.99	—	—	—	0.01	ok
6ZXG_T	P39019	40S ribosomal protein S19	EM	2.60	2020-07-29	—	92.00	0.99	—	—	—	0.01	ok
6ZXG_O	P62263	40S ribosomal protein S14	EM	2.60	2020-07-29	—	90.12	0.99	—	—	—	0.01	ok
6ZJ1_AAA	Q5SRI9	Glycoprotein endo-alpha-1,2-mannosidase	X-ray	1.96	2020-06-27	—	86.44	0.99	—	—	—	0.01	ok
6ZXG_B	P61247	40S ribosomal protein S3a	EM	2.60	2020-07-29	—	82.94	0.99	—	—	—	0.01	ok
6ZXE_A	P08865	40S ribosomal protein SA	EM	3.00	2020-07-29	—	79.25	0.99	—	—	—	0.01	ok
6ZXG_A	P08865	40S ribosomal protein SA	EM	2.60	2020-07-29	—	79.25	0.99	—	—	—	0.01	ok
6XK9_C	Q96SW2	Protein cereblon	X-ray	3.64	2020-06-25	—	86.62	0.99	—	—	—	0.01	ok
6ZXF_E	P62701	40S ribosomal protein S4, X isoform	EM	3.70	2020-07-29	—	95.56	0.99	—	—	—	0.01	ok
6ZXG_W	P62244	40S ribosomal protein S15a	EM	2.60	2020-07-29	—	93.06	0.99	—	—	—	0.01	ok
6ZXF_C	P15880	40S ribosomal protein S2	EM	3.70	2020-07-29	—	80.94	0.99	—	—	—	0.01	ok
6ZXG_K	P46783	40S ribosomal protein S10	EM	2.60	2020-07-29	—	73.81	0.99	—	—	—	0.01	ok
6ZXG_g	P63244	Receptor of activated protein C kinase 1	EM	2.60	2020-07-29	—	92.44	0.99	—	—	—	0.01	ok
6ZXE_C	P15880	40S ribosomal protein S2	EM	3.00	2020-07-29	—	80.94	0.99	—	—	—	0.01	ok
6VL4_A	O14684	Prostaglandin E synthase	X-ray	1.40	2020-01-22	—	96.06	0.99	—	—	—	0.01	ok
6ZXG_C	P15880	40S ribosomal protein S2	EM	2.60	2020-07-29	—	80.94	0.99	—	—	—	0.01	ok
6WKW_A	P56545	C-terminal-binding protein 2	EM	3.60	2020-04-17	—	83.38	0.99	—	—	—	0.01	ok
6ZXG_F	P46782	40S ribosomal protein S5	EM	2.60	2020-07-29	—	90.44	0.99	—	—	—	0.01	ok
7DH6_A	O43660	Pleiotropic regulator 1	X-ray	2.58	2020-11-13	—	77.38	0.99	—	—	—	0.01	ok
6WMO_A	Q9NY97	N-acetyllactosaminide beta-1,3-N-acetylglu	X-ray	1.85	2020-04-21	—	91.06	0.99	—	—	—	0.01	ok
6ZXE_E	P62701	40S ribosomal protein S4, X isoform	EM	3.00	2020-07-29	—	95.56	0.99	—	—	—	0.01	ok
6ZXD_E	P62701	40S ribosomal protein S4, X isoform	EM	3.20	2020-07-29	—	95.56	0.99	—	—	—	0.01	ok
6WMN_A	Q9NY97	N-acetyllactosaminide beta-1,3-N-acetylglu	X-ray	2.04	2020-04-21	—	91.06	0.99	—	—	—	0.00	ok
6ZXG_E	P62701	40S ribosomal protein S4, X isoform	EM	2.60	2020-07-29	—	95.56	1.00	—	—	—	0.00	ok
6WMM_A	Q9NY97	N-acetyllactosaminide beta-1,3-N-acetylglu	X-ray	1.55	2020-04-21	—	91.06	1.00	—	—	—	0.00	ok
6Z8L_A	P04746	Pancreatic alpha-amylase	X-ray	1.40	2020-06-02	—	96.75	1.00	—	—	—	0.00	ok

Click a column header to sort. FRAUD = confidence-weighted error; a structure is flagged confidently wrong when mean pLDDT > 70 yet TM-score < 0.5.