Release week 2020-10-21

Jump to:

150

structures analysed (27 full · 18.0%)

00.0%

confidently wrong

32.0%

novel sequences

00.0%

novel & wrong

0.952

median TM-score

⭐ This week's notable releases

3 novel sequences, 0 confidently wrong. Highlight: Microcephalin.

PDB	Protein	Flags	Why it matters
7C5D_C ↗	Microcephalin	novel · 100%	Genuinely unseen sequence (0% identity to anything AlphaFold trained on).
6LPG_A ↗	Tubulinyl-Tyr carboxypeptidase 1	novel · 100%	Genuinely unseen sequence (0% identity to anything AlphaFold trained on) — AlphaFold predicted it correctly (TM 0.95).
6LPG_B ↗	Small vasohibin-binding protein	novel · 100%	Genuinely unseen sequence (0% identity to anything AlphaFold trained on) — AlphaFold predicted it correctly (TM 0.89).

see all 150 structures ↓

Zoomed into the red "confidently wrong" box above (pLDDT ≥ 70, TM < 0.5) — the structures AlphaFold got confidently wrong.

How to read this

Every point is one experimental protein structure. The horizontal axis is AlphaFold's own confidence in its prediction (mean pLDDT, 0–100). The vertical axis is how well that blind prediction actually matches the experiment (TM-score, 0–1; above 0.5 means the same fold, above 0.9 near-identical). Marker size grows with the FRAUD score (confidence-weighted error).

Cutoff: the shaded red box is the "confidently wrong" zone — AlphaFold was confident (mean pLDDT above 70) yet the fold is wrong (TM-score below 0.5). A predictor that had truly solved folding would leave that box empty.

Take-home: 0 of 150 structures (0.0%) are confidently wrong; median TM-score is 0.952.

Read moreShow less — how each metric is calculated

TM-score: how similar the two 3D shapes are overall, 0–1 (a random pair scores ~0.17, an identical fold ~1). Length-normalised so large and small proteins compare fairly. TM = (1/L) Σᵢ 1/(1 + (dᵢ/d₀)²) — dᵢ is the gap between the i-th aligned Cα atoms after best-fit superposition, and d₀ = 1.24(L−15)^⅓ − 1.8 sets the distance scale for length L. Ref: Zhang & Skolnick, Proteins 2004 doi:10.1002/prot.20264; computed with TM-align, doi:10.1093/nar/gki524.

pLDDT: AlphaFold's own confidence in each residue, 0–100 (higher = surer). It is the model predicting its own accuracy before ever seeing the experiment. We plot the per-structure mean. pLDDT = (1/N) Σᵢ pLDDTᵢ, where pLDDTᵢ is the network's confidence output for residue i.

FRAUD score: the headline number — how wrong the prediction was, weighted by how confident AlphaFold was, so a big error it was sure about counts most. FRAUD = (1/N) Σᵢ (pLDDTᵢ/100) · min(Δᵢ,15)/15, where Δᵢ is residue i's Cα distance from the experiment (Å) after superposition, capped at 15 Å. Runs 0 (perfect) to 1.

Novelty: how little AlphaFold had to go on — 100 minus the highest sequence identity between this protein and any structure released before the 2018-04-30 training cutoff. High = genuinely unseen (100% = nothing similar was ever in the training set). novelty = 100 − maxₚ identity(s, p) over pre-cutoff PDB chains p, with identity = 100 × (matching aligned residues)/(alignment length), from an MMseqs2 search.

Homology: the point colour. High novelty (above 70%) flags the sequence as novel (amber) — AlphaFold had no close template; otherwise a pre-cutoff homolog existed (blue) it could have learned the fold from. novel ⇔ novelty > 70%.

What the metrics mean

TM-score (0–1): overall fold match — above 0.5 is the same fold, above 0.9 near-identical. Cα-RMSD (Å): average backbone distance after best-fit superposition — lower is better (under 2 Å is excellent). lDDT (0–1): local accuracy measured without superposition — above 0.8 is good. Each bar counts how many structures fall in that range.

Take-home: median TM-score 0.952 — most predictions match the experimental fold well, with a long tail that do not.

Read moreShow less — how each metric is calculated

TM-score: overall shape match, 0–1 (above 0.5 = same fold, above 0.9 near-identical), length-normalised. TM = (1/L) Σᵢ 1/(1 + (dᵢ/d₀)²) with dᵢ the aligned-Cα gap after superposition and d₀ = 1.24(L−15)^⅓ − 1.8. Ref: Zhang & Skolnick, Proteins 2004 doi:10.1002/prot.20264.

Cα-RMSD: the average straight-line distance between matching backbone Cα atoms once the two structures are best-fit superposed (Å; lower is better, under ~2 Å excellent). RMSD = √( (1/N) Σᵢ |Pᵢ − (R·Qᵢ + t)|² ), with Pᵢ/Qᵢ the experimental/model Cα coordinates and R,t the rotation and translation from Kabsch superposition.

lDDT: local accuracy with no superposition — the fraction of short-range inter-residue distances the model reproduces, so it is not fooled by a single wrongly-placed domain. lDDT = (1/N) Σᵢ ¼ Σ_t 1[ |d_exp − d_model| < t ] over thresholds t ∈ {0.5, 1, 2, 4} Å and all residue pairs within 15 Å.

Trend over time

The blue line is the mean TM-score of the structures by their deposit month; the red bars count how many were confidently wrong. Binning by deposit date (rather than by when we processed them) gives an even timeline, tracking whether AlphaFold's accuracy on newly-deposited structures is holding steady, improving, or slipping as the PDB keeps growing. Months with fewer than 5 structures are omitted so each point is a meaningful average. A dashed trend line is drawn only if the change over time is statistically significant.

Read moreShow less — how each metric is calculated

Mean TM-score: the month's average shape-match score. TM̄ = (1/M) Σ TM over the M structures deposited that month.

Trend line: a monotonic-trend test over the monthly means — Mann-Kendall (Kendall's τ) for significance, with a robust Theil-Sen slope for the line. Rank-based, so it tolerates the skewed TM distribution and noisy low-count months. Shown only when p < 0.05; otherwise a note reports that no significant trend was found.

Confidently wrong: the count that were both confident and wrong. count( mean pLDDT > 70 AND TM < 0.5 ).

Matched structures

PDB	UniProt	Protein	Method	Å	Deposited	Novelty %	pLDDT	TM	lDDT	GDT_TS	RMSD	FRAUD	Flag
7K2V_A	Q9Y2I7	1-phosphatidylinositol 3-phosphate 5-kinas	EM	6.60	2020-09-09	67.80	70.26	0.59	0.44	4.28	26.85	0.52	ok
6TL0_B	Q96NW4	Ankyrin repeat domain-containing protein 2	NMR	—	2019-11-29	0.00	57.82	0.36	0.62	10.66	14.48	0.42	ok
6ZSA_t1	P52815	39S ribosomal protein L12, mitochondrial	EM	4.00	2020-07-15	9.50	85.32	0.58	0.82	24.46	9.25	0.37	ok
6ZSA_m	Q7Z7F7	39S ribosomal protein L55, mitochondrial	EM	4.00	2020-07-15	0.00	92.36	0.65	0.84	30.42	7.21	0.36	ok
6L4K_A	P02768	Serum albumin	X-ray	2.09	2019-10-17	0.00	95.06	0.84	0.91	44.15	4.43	0.25	ok
6ZHE_C	P13010	X-ray repair cross-complementing protein 5	EM	7.24	2020-06-23	—	83.12	0.72	—	—	—	0.23	ok
6ZSA_XH	Q9BYD2	39S ribosomal protein L9, mitochondrial	EM	4.00	2020-07-15	—	81.69	0.72	—	—	—	0.23	ok
6ZSA_8	Q9NQ50	39S ribosomal protein L40, mitochondrial	EM	4.00	2020-07-15	—	78.75	0.72	—	—	—	0.22	ok
6ZHE_B	P12956	X-ray repair cross-complementing protein 6	EM	7.24	2020-06-23	—	84.44	0.75	—	—	—	0.21	ok
6ZHA_B	P12956	X-ray repair cross-complementing protein 6	EM	3.91	2020-06-21	—	84.44	0.76	—	—	—	0.20	ok
7D7N_A	Q9NP58	ATP-binding cassette sub-family B member 6	EM	5.20	2020-10-05	—	83.06	0.76	—	—	—	0.20	ok
6ZSA_AZ	Q9Y291	28S ribosomal protein S33, mitochondrial	EM	4.00	2020-07-15	—	91.19	0.80	—	—	—	0.18	ok
6ZSA_A0	P82930	28S ribosomal protein S34, mitochondrial	EM	4.00	2020-07-15	—	81.88	0.78	—	—	—	0.18	ok
6ZSA_p	Q14197	Peptidyl-tRNA hydrolase ICT1, mitochondria	EM	4.00	2020-07-15	—	84.44	0.80	—	—	—	0.17	ok
6ZH6_B	P13010	X-ray repair cross-complementing protein 5	EM	3.93	2020-06-21	0.00	37.65	0.58	0.23	25.00	7.17	0.16	ok
6ZSA_a	Q9Y6G3	39S ribosomal protein L42, mitochondrial	EM	4.00	2020-07-15	—	74.88	0.79	—	—	—	0.16	ok
7C5D_C	Q8NEM0	Microcephalin	X-ray	2.15	2020-05-19	100.00 novel	33.17	0.35	0.34	21.88	6.74	0.14	ok
6ZSA_XI	Q7Z7H8	39S ribosomal protein L10, mitochondrial	EM	4.00	2020-07-15	—	82.81	0.83	—	—	—	0.14	ok
6ZSA_l	Q6P161	39S ribosomal protein L54, mitochondrial	EM	4.00	2020-07-15	0.00	89.01	0.69	0.83	61.25	2.67	0.14	ok
6LF0_A	Q96JP0	Protein fem-1 homolog C	X-ray	2.11	2019-11-27	64.10	95.10	0.93	0.93	68.43	5.20	0.14	ok
6ZSA_AU	Q9BYN8	28S ribosomal protein S26, mitochondrial	EM	4.00	2020-07-15	—	89.06	0.85	—	—	—	0.13	ok
7K1W_F	Q92562	Fig4 Sac homology model	EM	5.10	2020-09-08	—	79.94	0.84	—	—	—	0.13	ok
6LPG_A	Q7L8A9	Tubulinyl-Tyr carboxypeptidase 1	X-ray	2.30	2020-01-10	100.00 novel	95.56	0.95	0.94	70.68	6.18	0.13	ok
6LBF_A	Q9UK73	Protein fem-1 homolog B	X-ray	3.25	2019-11-14	60.50	96.08	0.92	0.90	73.47	4.83	0.12	ok
6ZSA_XM	Q9P015	39S ribosomal protein L15, mitochondrial	EM	4.00	2020-07-15	—	91.00	0.87	—	—	—	0.12	ok
6ZSA_XT	Q9NWU5	39S ribosomal protein L22, mitochondrial	EM	4.00	2020-07-15	—	85.31	0.86	—	—	—	0.12	ok
6ZSA_6	Q96DV4	39S ribosomal protein L38, mitochondrial	EM	4.00	2020-07-15	—	82.81	0.86	—	—	—	0.12	ok
6ZSA_q	Q8TAE8	Growth arrest and DNA damage-inducible pro	EM	4.00	2020-07-15	—	86.56	0.87	—	—	—	0.11	ok
6LE6_A	Q96JP0	Protein fem-1 homolog C,10-mer peptide	X-ray	2.33	2019-11-24	64.10	95.47	0.95	0.89	77.23	5.32	0.11	ok
7K2V_P	Q9Y2I7	1-phosphatidylinositol 3-phosphate 5-kinas	EM	6.60	2020-09-09	—	63.19	0.83	—	—	—	0.11	ok
6ZSA_AY	Q92665	28S ribosomal protein S31, mitochondrial	EM	4.00	2020-07-15	—	66.12	0.84	—	—	—	0.11	ok
6ZSA_XK	Q9BYD1	39S ribosomal protein L13, mitochondrial	EM	4.00	2020-07-15	—	93.19	0.89	—	—	—	0.11	ok
6TOQ_AAA	Q13362	Serine/threonine-protein phosphatase 2A 56	X-ray	3.16	2019-12-11	0.00	95.72	0.95	0.91	75.68	2.35	0.11	ok
7A69_A	P08183	Multidrug resistance protein 1	EM	3.20	2020-08-25	—	84.56	0.88	—	—	—	0.10	ok
6ZSA_o	Q9BQC6	Ribosomal protein 63, mitochondrial	EM	4.00	2020-07-15	—	92.38	0.89	—	—	—	0.10	ok
6ZSA_XV	Q96A35	39S ribosomal protein L24, mitochondrial	EM	4.00	2020-07-15	—	88.88	0.89	—	—	—	0.10	ok
6ZSA_2	Q9BQ48	39S ribosomal protein L34, mitochondrial	EM	4.00	2020-07-15	—	79.62	0.88	—	—	—	0.10	ok
6LEN_A	Q96JP0	Protein fem-1 homolog C,NS11 peptide	X-ray	2.38	2019-11-25	64.10	95.79	0.95	0.91	82.38	4.46	0.09	ok
6ZSA_9	Q8IXM3	39S ribosomal protein L41, mitochondrial	EM	4.00	2020-07-15	—	90.94	0.91	—	—	—	0.08	ok
7A78_B	Q15596	Nuclear receptor coactivator 2	X-ray	1.72	2020-08-27	—	64.10	0.59	0.84	75.00	2.30	0.08	ok
6VWC_A	Q07817	Bcl-2-like protein 1	X-ray	1.60	2020-02-19	—	72.50	0.90	—	—	—	0.08	ok
7A79_C	Q15596	Nuclear receptor coactivator 2	X-ray	2.05	2020-08-27	—	64.10	0.58	0.84	71.15	2.23	0.08	ok
6ZSA_A2	Q96BP2	Coiled-coil-helix-coiled-coil-helix domain	EM	4.00	2020-07-15	—	92.38	0.92	—	—	—	0.07	ok
6ZSA_XQ	P49406	39S ribosomal protein L19, mitochondrial	EM	4.00	2020-07-15	—	83.88	0.91	—	—	—	0.07	ok
6ZSA_AS	Q9Y3D9	28S ribosomal protein S23, mitochondrial	EM	4.00	2020-07-15	—	77.31	0.91	—	—	—	0.07	ok
6ZSA_AE	P82932	28S ribosomal protein S6, mitochondrial	EM	4.00	2020-07-15	—	92.69	0.92	—	—	—	0.07	ok
6ZSA_1	O75394	39S ribosomal protein L33, mitochondrial	EM	4.00	2020-07-15	—	91.25	0.92	—	—	—	0.07	ok
7D7R_A	Q9NP58	ATP-binding cassette sub-family B member 6	EM	4.00	2020-10-05	—	83.06	0.92	—	—	—	0.07	ok
6ZSA_AJ	O15235	28S ribosomal protein S12, mitochondrial	EM	4.00	2020-07-15	—	86.44	0.92	—	—	—	0.07	ok
7A77_B	Q15596	Nuclear receptor coactivator 2	X-ray	1.50	2020-08-27	—	65.54	0.69	0.84	81.25	2.06	0.06	ok
6ZSA_e	Q9H2W6	39S ribosomal protein L46, mitochondrial	EM	4.00	2020-07-15	—	79.69	0.92	—	—	—	0.06	ok
6ZDM_BBB	Q9Y251	Heparanase	X-ray	1.71	2020-06-14	—	94.69	0.94	—	—	—	0.06	ok
6ZSA_AO	Q9Y676	28S ribosomal protein S18b, mitochondrial	EM	4.00	2020-07-15	—	82.19	0.93	—	—	—	0.06	ok
6ZSA_A1	P82673	28S ribosomal protein S35, mitochondrial	EM	4.00	2020-07-15	—	84.75	0.93	—	—	—	0.06	ok
6ZSA_XJ	Q9Y3B7	39S ribosomal protein L11, mitochondrial	EM	4.00	2020-07-15	—	83.75	0.93	—	—	—	0.06	ok
6W4K_B	Q9UKL0	REST corepressor 1	X-ray	2.93	2020-03-11	—	68.50	0.92	—	—	—	0.06	ok
7CRO_I	O96028	Histone-lysine N-methyltransferase NSD2	EM	3.75	2020-08-14	—	65.62	0.92	—	—	—	0.06	ok
7JMS_B	P0CG47	Polyubiquitin-B	X-ray	2.78	2020-08-02	—	93.44	0.94	—	—	—	0.06	ok
7CRQ_I	Q9BZ95	Histone-lysine N-methyltransferase NSD3	EM	3.15	2020-08-14	—	61.94	0.91	—	—	—	0.05	ok
6ZSA_i	Q4U2R6	39S ribosomal protein L51, mitochondrial	EM	4.00	2020-07-15	—	85.88	0.94	—	—	—	0.05	ok
6ZSA_h	Q8N5N7	39S ribosomal protein L50, mitochondrial	EM	4.00	2020-07-15	—	80.31	0.93	—	—	—	0.05	ok
7CRP_I	Q9BZ95	Histone-lysine N-methyltransferase NSD3	EM	3.20	2020-08-14	—	61.94	0.92	—	—	—	0.05	ok
6ZSA_j	Q86TS9	39S ribosomal protein L52, mitochondrial	EM	4.00	2020-07-15	—	85.50	0.94	—	—	—	0.05	ok
6ZSA_4	Q9P0J6	39S ribosomal protein L36, mitochondrial	EM	4.00	2020-07-15	—	71.50	0.93	—	—	—	0.05	ok
6ZSA_AT	P82663	28S ribosomal protein S25, mitochondrial	EM	4.00	2020-07-15	—	92.44	0.95	—	—	—	0.05	ok
6OPN_C	P01730	T-cell surface glycoprotein CD4	EM	3.50	2019-04-25	2.20	93.52	0.94	0.90	92.89	0.92	0.05	ok
6ZSA_g	Q13405	39S ribosomal protein L49, mitochondrial	EM	4.00	2020-07-15	—	84.56	0.95	—	—	—	0.05	ok
6ZSA_f	Q96GC5	39S ribosomal protein L48, mitochondrial	EM	4.00	2020-07-15	—	76.31	0.94	—	—	—	0.05	ok
6ZSA_AP	Q9Y3D5	28S ribosomal protein S18c, mitochondrial	EM	4.00	2020-07-15	—	79.44	0.94	—	—	—	0.04	ok
6ZSA_A4	Q96EY7	Pentatricopeptide repeat domain-containing	EM	4.00	2020-07-15	—	79.00	0.94	—	—	—	0.04	ok
6ZSA_AW	Q9Y2Q9	28S ribosomal protein S28, mitochondrial	EM	4.00	2020-07-15	—	77.62	0.94	—	—	—	0.04	ok
7CRR_I	Q9BZ95	Histone-lysine N-methyltransferase NSD3	EM	3.48	2020-08-14	—	61.94	0.93	—	—	—	0.04	ok
6ZSA_A3	Q9NWT8	Aurora kinase A-interacting protein	EM	4.00	2020-07-15	—	67.69	0.94	—	—	—	0.04	ok
7CFT_A	P78348	Acid-sensing ion channel 1	EM	3.90	2020-06-28	—	83.75	0.95	—	—	—	0.04	ok
7BTN_A	Q15181	Inorganic pyrophosphatase	X-ray	2.38	2020-04-02	—	96.19	0.96	—	—	—	0.04	ok
6ZHA_C	P13010	X-ray repair cross-complementing protein 5	EM	3.91	2020-06-21	—	83.12	0.95	—	—	—	0.04	ok
6S96_A	Q16763	Ubiquitin-conjugating enzyme E2 S	X-ray	2.18	2019-07-11	0.70	95.86	0.97	0.93	94.30	0.97	0.04	ok
6X5C_C	P01730	T-cell surface glycoprotein CD4	EM	4.04	2020-05-25	—	85.25	0.95	—	—	—	0.04	ok
6ZSA_AM	Q9Y3D3	28S ribosomal protein S16, mitochondrial	EM	4.00	2020-07-15	—	90.62	0.96	—	—	—	0.04	ok
6ZSA_k	Q96EL3	39S ribosomal protein L53, mitochondrial	EM	4.00	2020-07-15	—	80.69	0.95	—	—	—	0.04	ok
6ZSA_AQ	P82921	28S ribosomal protein S21, mitochondrial	EM	4.00	2020-07-15	—	96.31	0.96	—	—	—	0.04	ok
7CFS_A	P78348	Acid-sensing ion channel 1	EM	3.56	2020-06-28	—	83.75	0.95	—	—	—	0.04	ok
6ZSA_XS	Q7Z2W9	39S ribosomal protein L21, mitochondrial	EM	4.00	2020-07-15	—	84.81	0.96	—	—	—	0.04	ok
7CZE_I	P29317	Ephrin type-A receptor 2	X-ray	3.00	2020-09-08	—	82.25	0.96	—	—	—	0.03	ok
6X5B_C	P01730	T-cell surface glycoprotein CD4	EM	3.60	2020-05-25	—	85.25	0.96	—	—	—	0.03	ok
6OPQ_C	P01730	T-cell surface glycoprotein CD4	EM	3.80	2019-04-25	2.20	93.59	0.97	0.94	96.91	0.68	0.03	ok
6S98_A	Q16763	Ubiquitin-conjugating enzyme E2 S	X-ray	1.55	2019-07-11	0.00	95.92	0.98	0.96	97.13	0.86	0.03	ok
6ZSA_AK	O60783	28S ribosomal protein S14, mitochondrial	EM	4.00	2020-07-15	—	86.19	0.96	—	—	—	0.03	ok
6ZSA_XR	Q9BYC9	39S ribosomal protein L20, mitochondrial	EM	4.00	2020-07-15	—	91.00	0.96	—	—	—	0.03	ok
6ZSA_AN	Q9Y2R5	28S ribosomal protein S17, mitochondrial	EM	4.00	2020-07-15	—	92.81	0.97	—	—	—	0.03	ok
6ZSA_AL	P82914	28S ribosomal protein S15, mitochondrial	EM	4.00	2020-07-15	—	78.44	0.96	—	—	—	0.03	ok
6ZSA_AH	P82664	28S ribosomal protein S10, mitochondrial	EM	4.00	2020-07-15	—	78.69	0.96	—	—	—	0.03	ok
7CM5_A	Q6SZW1	NAD(+) hydrolase SARM1	EM	2.60	2020-07-24	—	85.69	0.96	—	—	—	0.03	ok
6ZSA_XU	Q16540	39S ribosomal protein L23, mitochondrial	EM	4.00	2020-07-15	—	92.31	0.97	—	—	—	0.03	ok
7CM7_A	Q6SZW1	NAD(+) hydrolase SARM1	EM	2.60	2020-07-25	—	85.69	0.96	—	—	—	0.03	ok
6ZSA_AV	Q92552	28S ribosomal protein S27, mitochondrial	EM	4.00	2020-07-15	—	80.19	0.96	—	—	—	0.03	ok
6ZSA_0	Q9BYC8	39S ribosomal protein L32, mitochondrial	EM	4.00	2020-07-15	—	76.81	0.96	—	—	—	0.03	ok
6ZSA_AF	Q9Y2R9	28S ribosomal protein S7, mitochondrial	EM	4.00	2020-07-15	—	86.81	0.97	—	—	—	0.03	ok
6OPP_C	P01730	T-cell surface glycoprotein CD4	EM	3.70	2019-04-25	2.20	93.59	0.98	0.95	97.42	0.59	0.03	ok
7CZF_A	P29317	Ephrin type-A receptor 2	X-ray	3.20	2020-09-08	—	82.25	0.97	—	—	—	0.03	ok
6ZSA_AG	P82933	28S ribosomal protein S9, mitochondrial	EM	4.00	2020-07-15	—	82.06	0.97	—	—	—	0.03	ok
6Z8P_AAA	P25440	Bromodomain-containing protein 2	X-ray	1.55	2020-06-02	—	64.06	0.96	—	—	—	0.03	ok
6OPO_C	P01730	T-cell surface glycoprotein CD4	EM	3.50	2019-04-25	2.20	93.59	0.98	0.96	98.20	0.59	0.03	ok
7CM6_A	Q6SZW1	NAD(+) hydrolase SARM1	EM	3.00	2020-07-25	—	85.69	0.97	—	—	—	0.03	ok
6LPG_B	Q8N300	Small vasohibin-binding protein	X-ray	2.30	2020-01-10	100.00 novel	98.08	0.89	1.00	98.21	0.49	0.03	ok
6ZSA_XW	Q9P0M9	39S ribosomal protein L27, mitochondrial	EM	4.00	2020-07-15	—	86.75	0.97	—	—	—	0.03	ok
6ZSA_AC	Q96EL2	28S ribosomal protein S24, mitochondrial	EM	4.00	2020-07-15	—	86.06	0.97	—	—	—	0.03	ok
6ZSA_AD	P82675	28S ribosomal protein S5, mitochondrial	EM	4.00	2020-07-15	—	81.88	0.97	—	—	—	0.03	ok
6ZSA_r	Q9NVS2	39S ribosomal protein S18a, mitochondrial	EM	4.00	2020-07-15	—	85.69	0.97	—	—	—	0.03	ok
6Z1N_A	Q86SQ9	Dehydrodolichyl diphosphate synthase compl	X-ray	2.30	2020-05-14	—	94.75	0.97	—	—	—	0.02	ok
6ULB_A	P04278	Sex hormone-binding globulin	X-ray	1.75	2019-10-07	0.50	92.91	0.99	0.96	97.51	0.70	0.02	ok
6ZSA_XL	Q6P1L8	39S ribosomal protein L14, mitochondrial	EM	4.00	2020-07-15	—	85.50	0.97	—	—	—	0.02	ok
6ZSA_XZ	Q8TCC3	39S ribosomal protein L30, mitochondrial	EM	4.00	2020-07-15	—	82.75	0.97	—	—	—	0.02	ok
6ZSA_3	Q9NZE8	39S ribosomal protein L35, mitochondrial	EM	4.00	2020-07-15	—	74.62	0.97	—	—	—	0.02	ok
6ZSA_XY	Q9HD33	39S ribosomal protein L47, mitochondrial	EM	4.00	2020-07-15	—	82.75	0.97	—	—	—	0.02	ok
6ZSA_XO	Q9NRX2	39S ribosomal protein L17, mitochondrial	EM	4.00	2020-07-15	—	93.06	0.98	—	—	—	0.02	ok
6ZSA_AX	P51398	28S ribosomal protein S29, mitochondrial	EM	4.00	2020-07-15	—	85.00	0.98	—	—	—	0.02	ok
6ZSA_AR	P82650	28S ribosomal protein S22, mitochondrial	EM	4.00	2020-07-15	—	81.88	0.98	—	—	—	0.02	ok
6ZSA_XP	Q9H0U6	39S ribosomal protein L18, mitochondrial	EM	4.00	2020-07-15	—	86.62	0.98	—	—	—	0.02	ok
7C5D_A	Q15554	Telomeric repeat-binding factor 2	X-ray	2.15	2020-05-19	—	68.00	0.97	—	—	—	0.02	ok
6ZSA_XN	Q9NX20	39S ribosomal protein L16, mitochondrial	EM	4.00	2020-07-15	—	88.75	0.98	—	—	—	0.02	ok
7A9U_AAA	O60885	Bromodomain-containing protein 4	X-ray	1.44	2020-09-02	—	55.31	0.97	—	—	—	0.02	ok
6ZSA_XX	Q13084	39S ribosomal protein L28, mitochondrial	EM	4.00	2020-07-15	—	92.31	0.98	—	—	—	0.02	ok
6ZSA_AI	P82912	28S ribosomal protein S11, mitochondrial	EM	4.00	2020-07-15	—	82.94	0.98	—	—	—	0.02	ok
6ZSA_5	Q9BZE1	39S ribosomal protein L37, mitochondrial	EM	4.00	2020-07-15	—	89.06	0.98	—	—	—	0.02	ok
7KDT_A	O94826	Mitochondrial import receptor subunit TOM7	EM	3.05	2020-10-09	—	80.06	0.98	—	—	—	0.01	ok
6TI9_A	P02766	Transthyretin	X-ray	1.45	2019-11-22	0.00	97.91	1.00	1.00	100.00	0.26	0.01	ok
6ZSA_7	Q9NYK5	39S ribosomal protein L39, mitochondrial	EM	4.00	2020-07-15	—	84.12	0.98	—	—	—	0.01	ok
6ZSA_b	Q8N983	39S ribosomal protein L43, mitochondrial	EM	4.00	2020-07-15	—	82.75	0.98	—	—	—	0.01	ok
6ZSA_d	Q9BRJ2	39S ribosomal protein L45, mitochondrial	EM	4.00	2020-07-15	—	80.62	0.98	—	—	—	0.01	ok
7A77_A	P19793	Retinoic acid receptor RXR-alpha	X-ray	1.50	2020-08-27	—	75.38	0.98	—	—	—	0.01	ok
6T27_A	P15121	Aldo-keto reductase family 1 member B1	X-ray	1.11	2019-10-08	0.40	98.33	1.00	0.99	99.45	0.30	0.01	ok
6ZSA_c	Q9H9J2	39S ribosomal protein L44, mitochondrial	EM	4.00	2020-07-15	—	88.00	0.99	—	—	—	0.01	ok
6ZSA_XE	P09001	39S ribosomal protein L3, mitochondrial	EM	4.00	2020-07-15	—	86.75	0.99	—	—	—	0.01	ok
6ZSA_XF	Q9BYD3	39S ribosomal protein L4, mitochondrial	EM	4.00	2020-07-15	—	83.75	0.99	—	—	—	0.01	ok
6ZOV_A	P98073	Enteropeptidase	X-ray	2.19	2020-07-07	—	81.50	0.99	—	—	—	0.01	ok
7CMO_A	Q15181	Inorganic pyrophosphatase	X-ray	3.40	2020-07-28	—	96.19	0.99	—	—	—	0.01	ok
6ZSA_XD	Q5T653	39S ribosomal protein L2, mitochondrial	EM	4.00	2020-07-15	—	85.38	0.99	—	—	—	0.01	ok
6ZSA_s	Q9NP92	39S ribosomal protein S30, mitochondrial	EM	4.00	2020-07-15	—	87.62	0.99	—	—	—	0.01	ok
7K2U_A	Q02127	Dihydroorotate dehydrogenase (quinone), mi	X-ray	1.73	2020-09-09	—	96.12	0.99	—	—	—	0.01	ok
6Z1N_B	Q96E22	Dehydrodolichyl diphosphate synthase compl	X-ray	2.30	2020-05-14	—	82.00	0.99	—	—	—	0.01	ok
6W4K_A	O60341	Lysine-specific histone demethylase 1A	X-ray	2.93	2020-03-11	—	84.19	0.99	—	—	—	0.01	ok
6ZSA_AB	Q9Y399	28S ribosomal protein S2, mitochondrial	EM	4.00	2020-07-15	—	82.31	0.99	—	—	—	0.01	ok
7A78_A	P28702	Retinoic acid receptor RXR-beta	X-ray	1.72	2020-08-27	—	70.94	0.99	—	—	—	0.01	ok
6ZDM_AAA	Q9Y251	Heparanase	X-ray	1.71	2020-06-14	—	94.69	0.99	—	—	—	0.01	ok
7A79_A	P48443	Retinoic acid receptor RXR-gamma	X-ray	2.05	2020-08-27	—	73.88	0.99	—	—	—	0.00	ok
7JGL_A	P02794	Ferritin heavy chain	X-ray	2.34	2020-07-19	—	95.31	1.00	—	—	—	0.00	ok
6UZU_A	P00918	Carbonic anhydrase 2	X-ray	1.50	2019-11-15	—	97.38	1.00	—	—	—	0.00	ok
7JGQ_A	P02794	Ferritin heavy chain	X-ray	3.01	2020-07-19	—	95.31	1.00	—	—	—	0.00	ok
6YL4_A	P34913	Bifunctional epoxide hydrolase 2	X-ray	2.00	2020-04-06	—	93.31	1.00	—	—	—	0.00	ok

Click a column header to sort. FRAUD = confidence-weighted error; a structure is flagged confidently wrong when mean pLDDT > 70 yet TM-score < 0.5.