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New PDB Depositions vs. Their Blind AlphaFold Predictions — A Running Test of “Is Folding Solved?”

8EI4_A

NEDD4-like E3 ubiquitin-protein ligase WWP1 · Q9H0M0 · RCSB 8EI4 · AF-Q9H0M0-F1 (v6)

Screen-only record. This structure passed the fast TM-score screen (TM 0.98) and AlphaFold agrees well with experiment, so the full metric suite, novelty score and heatmaps were not computed. Full analysis is reserved for the disagreements (TM below the screening threshold).
0.98
TM-score
lDDT
Cα-RMSD Å
75.44
mean pLDDT
0.01
FRAUD score
—%
novelty

All metrics

Global fold agreement

TM-score (norm. experiment)0.98
TM-score (norm. model)0.39
TM-score (norm. shorter)0.98
TM-score (norm. longer)0.39

Local, superposition-free

Backbone & secondary structure

Confidence calibration

mean pLDDT75.44

Context & headline

FRAUD score0.01

Deposited 2022-09-14 · released 2023-10-25 · X-ray · 2.43 Å · closest pre-cutoff chain: none