26LK_A novel
Ribosomal biogenesis protein LAS1L · Q9Y4W2 · RCSB 26LK · AF-Q9Y4W2-F1 (v6)
0.693
TM-score
0.7679
lDDT
25.147
Cα-RMSD Å
71.4
mean pLDDT
0.64
FRAUD score
0.0%
novelty (max id)
Per-domain breakdown
| Source | Domain | Range | Residues | TM | RMSD Å | mean Cα Δ | Name |
|---|---|---|---|---|---|---|---|
| PAE | PAE:1-734 | 1-734 | 186 | 0.0938 | 25.147 | 22.449 |
All metrics
Global fold agreement
| TM-score (norm. experiment) | 0.693 |
| TM-score (norm. model) | 0.1956 |
| TM-score (norm. shorter) | 0.693 |
| TM-score (norm. longer) | 0.1956 |
| Cα-RMSD (Å) | 25.147 |
| backbone-RMSD (Å) | 25.05 |
| all-atom-RMSD (Å) | 24.437 |
| core-RMSD (Å) | 0.714 |
| core fraction | 0.554 |
| GDT_TS | 1.34 |
| GDT_HA | 0.13 |
| MaxSub | 0.0 |
| structural overlap (3.5 Å) | 0.0 |
Local, superposition-free
| lDDT | 0.7679 |
| contact-map Jaccard | 0.6937 |
| contact precision | 0.875 |
| contact recall | 0.77 |
| distance-matrix mean Δ (Å) | 11.393 |
| CAD-score (approx) | 0.8307 |
Backbone & secondary structure
| SS agreement Q3 (%) | 81.18 |
| mean Δφ (°) | 18.5 |
| mean Δψ (°) | 24.5 |
| torsion within 30° (frac) | 0.6774 |
| Rg experiment (Å) | 23.3 |
| Rg model (Å) | 27.17 |
| ΔRg (Å) | 3.87 |
Confidence calibration
| mean pLDDT | 71.4 |
| pLDDT↔lDDT Pearson | 0.8608 |
| pLDDT↔lDDT Spearman | 0.7858 |
| PAE↔observed Pearson | 0.7142 |
| PAE overconfident frac | 0.1993 |
| mean PAE (Å) | 13.998 |
| mean observed error (Å) | 11.331 |
Context & headline
| coverage of model | 0.2534 |
| coverage of experiment | 0.9347 |
| seq identity aligned (%) | 78.49 |
| confidently-wrong residue frac | 0.6613 |
| FRAUD score | 0.64 |
Deposited 2026-05-06 · released 2026-06-03 · EM · 3.4 Å · closest pre-cutoff chain: none