13BV_C novel
Beclin 1-associated autophagy-related key regulator · Q6ZNE5 · RCSB 13BV · AF-Q6ZNE5-F1 (v6)
0.872
TM-score
0.9428
lDDT
4.384
Cα-RMSD Å
93.15
mean pLDDT
0.1926
FRAUD score
0.0%
novelty (max id)
Per-domain breakdown
| Source | Domain | Range | Residues | TM | RMSD Å | mean Cα Δ | Name |
|---|---|---|---|---|---|---|---|
| PAE | PAE:1-492 | 1-492 | 262 | 0.7964 | 4.384 | 3.205 |
All metrics
Global fold agreement
| TM-score (norm. experiment) | 0.872 |
| TM-score (norm. model) | 0.4762 |
| TM-score (norm. shorter) | 0.872 |
| TM-score (norm. longer) | 0.4762 |
| Cα-RMSD (Å) | 4.384 |
| backbone-RMSD (Å) | 4.317 |
| all-atom-RMSD (Å) | 4.788 |
| core-RMSD (Å) | 0.616 |
| core fraction | 0.618 |
| GDT_TS | 54.87 |
| GDT_HA | 31.77 |
| MaxSub | 0.8988 |
| structural overlap (3.5 Å) | 0.6832 |
Local, superposition-free
| lDDT | 0.9428 |
| contact-map Jaccard | 0.8077 |
| contact precision | 0.9081 |
| contact recall | 0.8796 |
| distance-matrix mean Δ (Å) | 1.542 |
| CAD-score (approx) | 0.8488 |
Backbone & secondary structure
| SS agreement Q3 (%) | 88.55 |
| mean Δφ (°) | 9.7 |
| mean Δψ (°) | 11.6 |
| torsion within 30° (frac) | 0.8855 |
| Rg experiment (Å) | 58.2 |
| Rg model (Å) | 59.79 |
| ΔRg (Å) | 1.59 |
Confidence calibration
| mean pLDDT | 93.15 |
| pLDDT↔lDDT Pearson | 0.6766 |
| pLDDT↔lDDT Spearman | 0.7652 |
| PAE↔observed Pearson | 0.6646 |
| PAE overconfident frac | 0.0 |
| mean PAE (Å) | 10.644 |
| mean observed error (Å) | 1.536 |
Context & headline
| coverage of model | 0.5325 |
| coverage of experiment | 1.0 |
| seq identity aligned (%) | 100.0 |
| confidently-wrong residue frac | 0.2099 |
| FRAUD score | 0.1926 |
Deposited 2026-04-28 · released 2026-05-13 · EM · 3.77 Å · closest pre-cutoff chain: none